[Bioperl-l] Run::Primer3 and no primer return

Dave Messina David.Messina at sbc.su.se
Wed Oct 22 11:58:33 EDT 2008


Ciao Paola,

I don't have Primer3 installed locally so I can't run your code --  
hopefully someone so equipped will chime in.

But one thing I would try if you haven't already is to run your local  
copy of Primer3 on your test data on the command line outside of Perl  
to verify that it is working. Even though your script is checking that  
Primer3 is installed, that's probably just looking for the presence of  
an executable file at the location you specified.


Dave



More information about the Bioperl-l mailing list