[Bioperl-l] Fast BLAST parsing

Brian Osborne briano at bioteam.net
Thu Oct 23 12:22:09 EDT 2008


Bioperl,

I'm not familiar with the very latest and greatest in BLAST parsing,  
perhaps you can help me here. I have a large Blast output file, it has  
multiple results in it. I'd like to rapidly find the relevant result  
for a given query name, I don't want to iterate over the results  
checking for query_name() each time. How can I directly pull out a  
result using query name?


Thanks again,

Brian O.
--
Brian Osborne, PhD
BioTeam: http://bioteam.net
email: briano at bioteam.net
mobile: 978-317-3101



More information about the Bioperl-l mailing list