September 2008 Archives by thread

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Starting: Mon Sep 1 03:42:26 EDT 2008
Ending: Tue Sep 30 17:56:04 EDT 2008
Messages: 101

• [Bioperl-l] Bio::Tools::dpAlign feature request   Jason Stajich
  • [Bioperl-l] Bio::Tools::dpAlign feature request   Chris Fields
• [Bioperl-l] parsing result of CAP3 (ACE file)   Laurent Manchon
  • [Bioperl-l] parsing result of CAP3 (ACE file)   Joshua Udall
• [Bioperl-l] interpro parsing enhancement?   John Osborne
• [Bioperl-l] SeqHound   Raul Mendez Giraldez
  • [Bioperl-l] SeqHound   Brian Osborne
• [Bioperl-l] Fitch's Parsimony Algorithm with Perl   Gundala Viswanath
• [Bioperl-l] What's up with line 248 of Bio::Coordinate::Pair?   George Hartzell
  • [Bioperl-l] What's up with line 248 of Bio::Coordinate::Pair?   Chris Fields
    • [Bioperl-l] What's up with line 248 of Bio::Coordinate::Pair?   Jason Stajich
      • [Bioperl-l] What's up with line 248 of Bio::Coordinate::Pair?   Heikki Lehvaslaiho
      • [Bioperl-l] What's up with line 248 of Bio::Coordinate::Pair?   George Hartzell
• [Bioperl-l] Bio::Coordinate::Collection could DoWhatIMean better (w/ patch)   George Hartzell
  • [Bioperl-l] Bio::Coordinate::Collection could DoWhatIMean better (w/ patch)   Aaron Mackey
  • [Bioperl-l] Bio::Coordinate::Collection could DoWhatIMean better (w/ patch)   Heikki Lehvaslaiho
    • [Bioperl-l] Bio::Coordinate::Collection could DoWhatIMean better (w/ patch)   George Hartzell
    • [Bioperl-l] Bio::Coordinate::Collection could DoWhatIMean better (w/ patch)   George Hartzell
      • [Bioperl-l] Bio::Coordinate::Collection could DoWhatIMean better (w/ patch)   Reece Hart
    • [Bioperl-l] Bio::Coordinate::Collection could DoWhatIMean better (w/ patch)   George Hartzell
      • [Bioperl-l] Bio::Coordinate::Collection could DoWhatIMean better (w/ patch)   Heikki Lehvaslaiho
• [Bioperl-l] Circular genomes in Chado/BioPerl   Jim Hu
  • [Bioperl-l] [Gmod-schema] Circular genomes in Chado/BioPerl   Aaron Mackey
    • [Bioperl-l] [Gmod-schema] Circular genomes in Chado/BioPerl   Jim Hu
      • [Bioperl-l] [Gmod-schema] Circular genomes in Chado/BioPerl   Scott Cain
      • [Bioperl-l] [Gmod-schema] Circular genomes in Chado/BioPerl   Chris Fields
      • [Bioperl-l] [Gmod-schema] Circular genomes in Chado/BioPerl   Chris Fields
    • [Bioperl-l] [Gmod-schema] Circular genomes in Chado/BioPerl   Lincoln Stein
      • [Bioperl-l] [Gmod-schema] Circular genomes in Chado/BioPerl   Aaron Mackey
      • [Bioperl-l] [Gmod-schema] Circular genomes in Chado/BioPerl   Smithies, Russell
      • [Bioperl-l] [Gmod-schema] Circular genomes in Chado/BioPerl   Chris Mungall
  • [Bioperl-l] Circular genomes in Chado/BioPerl   James Smith
• [Bioperl-l] parsing result of CAP3 (ACE file)   Jean-Marc FRIGERIO
• [Bioperl-l] help:HMM parsing error   boyang zhe
  • [Bioperl-l] help:HMM parsing error   Sendu Bala
    • [Bioperl-l] help:HMM parsing error   Jason Stajich
• [Bioperl-l] phylogeny-trait association methods into BioPerl   Heikki Lehvaslaiho
  • [Bioperl-l] phylogeny-trait association methods into BioPerl   Hilmar Lapp
  • [Bioperl-l] phylogeny-trait association methods into BioPerl   Jason Stajich
  • [Bioperl-l] phylogeny-trait association methods into BioPerl   Heikki Lehvaslaiho
• [Bioperl-l] seqs, seqfeatures, locations etc   Johnston, Caroline
  • [Bioperl-l] seqs, seqfeatures, locations etc   Brian Osborne
• [Bioperl-l] difference in opening file from @ARGV and STDIN?   Felipe Figueiredo
  • [Bioperl-l] difference in opening file from @ARGV and STDIN?   Dave Messina
    • [Bioperl-l] difference in opening file from @ARGV and STDIN?   Cook, Malcolm
      • [Bioperl-l] difference in opening file from @ARGV and STDIN?   Dave Messina
      • [Bioperl-l] difference in opening file from @ARGV and STDIN?   Cook, Malcolm
      • [Bioperl-l] difference in opening file from @ARGV and STDIN?   Dave Messina
• [Bioperl-l] SeqHound   Brian Osborne
• [Bioperl-l] Bio::DB::Query::GenBank question   Andrew Couperthwaite
  • [Bioperl-l] Bio::DB::Query::GenBank question   Jason Stajich
    • [Bioperl-l] Bio::DB::Query::GenBank question   Andrew Couperthwaite
      • [Bioperl-l] Bio::DB::Query::GenBank question   Jason Stajich
      • [Bioperl-l] Bio::DB::Query::GenBank question   Brian Osborne
• [Bioperl-l] significant bug with Bio::LocatableSeq   Chris Fields
• [Bioperl-l] HSP tiling problem   =?gb2312?B?va3OxOL9?=
  • [Bioperl-l] HSP tiling problem   Jason Stajich
• [Bioperl-l] [Wg-phyloinformatics] Summer of Code: project summaries   Han, Mira
  • [Bioperl-l] [Wg-phyloinformatics] Summer of Code: project summaries   Chris Fields
• [Bioperl-l] Converting EnSeMBL Probe names to Gene Symbol with Bioperl   Gundala Viswanath
  • [Bioperl-l] Converting EnSeMBL Probe names to Gene Symbol with Bioperl   Cook, Malcolm
    • [Bioperl-l] Converting EnSeMBL Probe names to Gene Symbol with Bioperl   Chris Fields
      • [Bioperl-l] Converting EnSeMBL Probe names to Gene Symbol with Bioperl   Cook, Malcolm
    • [Bioperl-l] Converting EnSeMBL Probe names to Gene Symbol with Bioperl   Jason Stajich
      • [Bioperl-l] Converting EnSeMBL Probe names to Gene Symbol with Bioperl   Cook, Malcolm
• [Bioperl-l] Species.t tests failing with bioperl-live   Chris Fields
  • [Bioperl-l] Species.t tests failing with bioperl-live   Chris Fields
    • [Bioperl-l] Bio::Species bug, was Species.t tests failing with bioperl-live   Chris Fields
      • [Bioperl-l] Bio::Species bug, was Species.t tests failing with bioperl-live   Sendu Bala
      • [Bioperl-l] Bio::Species bug, was Species.t tests failing with bioperl-live   Chris Fields
      • [Bioperl-l] Bio::Species bug, was Species.t tests failing with bioperl-live   Sendu Bala
      • [Bioperl-l] Bio::Species bug, was Species.t tests failing with bioperl-live   Chris Fields
      • [Bioperl-l] Bio::Species bug, was Species.t tests failing with bioperl-live   George Hartzell
• [Bioperl-l] SimpleAlign/AlignIO   Bernd Web
  • [Bioperl-l] SimpleAlign/AlignIO   Chris Fields
• [Bioperl-l] Retrieving taxonomy information from a GenBank file   ANJAN PURKAYASTHA
  • [Bioperl-l] Retrieving taxonomy information from a GenBank file   Jason Stajich
    • [Bioperl-l] Retrieving taxonomy information from a GenBank file   Torsten Seemann
• [Bioperl-l] code coverage metrics   Spiros Denaxas
  • [Bioperl-l] code coverage metrics   Sendu Bala
• [Bioperl-l] code coverage metrics   Spiros Denaxas
  • [Bioperl-l] code coverage metrics   Spiros Denaxas
  • [Bioperl-l] code coverage metrics   Chris Fields
    • [Bioperl-l] code coverage metrics   Mauricio Herrera Cuadra
• [Bioperl-l] confused about version numbers.   George Hartzell
  • [Bioperl-l] confused about version numbers.   Sendu Bala
  • [Bioperl-l] confused about version numbers.   Steve Chervitz
• [Bioperl-l] Using Storable with SeqFeatures   Johnston, Caroline
  • [Bioperl-l] Using Storable with SeqFeatures   Hilmar Lapp
    • [Bioperl-l] Using Storable with SeqFeatures   Caroline
• [Bioperl-l] genbank2gff.pl choking on CONTIG sections   Scott Cain
  • [Bioperl-l] genbank2gff.pl choking on CONTIG sections   Jason Stajich
• [Bioperl-l] [BioSQL-l] Can't locate object method "get_dbxrefs"   john paul
  • [Bioperl-l] Can't locate object method "get_dbxrefs"   Brian Osborne
    • [Bioperl-l] [BioSQL-l] Can't locate object method "get_dbxrefs"   john paul
  • [Bioperl-l] Can't locate object method "get_dbxrefs"   Sendu Bala
• [Bioperl-l] BioPerl Installation Help   Matthew Schultz
• [Bioperl-l] exporting contigs with CDSes, stored via Bio::DB::GFF, into individual GenBank records?   Erich Schwarz
  • [Bioperl-l] exporting contigs with CDSes, stored via Bio::DB::GFF, into individual GenBank records?   Jason Stajich
• [Bioperl-l] [Gmod-gbrowse] exporting contigs with CDSes, stored via Bio::DB::GFF, into individual GenBank records?   Don Gilbert
• [Bioperl-l] Test coverage for BioPerl now available   Mauricio Herrera Cuadra

Last message date: Tue Sep 30 17:56:04 EDT 2008
Archived on: Tue Sep 30 17:56:13 EDT 2008

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