[Bioperl-l] Creating Cytoband Ideogram images

Scott Cain scott at scottcain.net
Fri Apr 10 09:08:53 EDT 2009

Hello Shafeeq,

You need Bio::Graphics::Glyph::ideogram, which is part of
Bio::Graphics.  You can install it from cpan and it will install
BioPerl 1.6 as a prereq.  The perldoc for ideogram.pm has example code
and data, since the format of the data is important.


On Thu, Apr 9, 2009 at 11:43 PM, shafeeq rim <hsa_rim at yahoo.co.in> wrote:
> Hi,
> I want to create CytoBand ideogram images from CytoBand data in NCBI data. Is there any module in BioPerl or any other way to do it ? I want to create chromosome cytoband ideograms for each chromosome.
> Thanks in advance
> Shafeeq
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Scott Cain, Ph. D.                                   scott at scottcain dot net
GMOD Coordinator (http://gmod.org/)                     216-392-3087
Ontario Institute for Cancer Research

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