[Bioperl-l] Parsing Genbank
bcantarel at som.umaryland.edu
Wed Dec 2 13:36:27 EST 2009
I am not sure if this is normal, but when I use SEQIO to parse genbank files, it changes the coordinates of things on the minus strand.
For example, I have a sequence that has a CDS on the minus strand at it is from 911 to 974. The sequence is 974 nt.
How can I get the original coordinates? Is there a command for that or will I have to just do the math?
Feature or Bug?
Brandi Cantarel, PhD
Institute for Genome Sciences
School of Medicine
University of Maryland, Baltimore
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