[Bioperl-l] Sequence Character Visualization

shafeeq rim hsa_rim at yahoo.co.in
Tue Feb 17 04:30:43 EST 2009


Hi guys,

I want to just visualize a sequence in horizontal manner reading from a genome fasta file / genbank file as per the given genomic location..

Suppose I want to visualize a sequence string from 1000 - 1100 nucleotides in horizontal string like manner in terms of an image.
Is there any such tool or library that can do it for me... I am not looking for alignments but just linear visualization.

Thanks


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