[Bioperl-l] Deprecated methods
cjfields at illinois.edu
Wed Jan 14 00:08:29 EST 2009
Just ack'ed through the code and I have found many methods are noted
as deprecated in bioperl, however they aren't clearly scheduled for
removal in any future version. Should we revise
Bio::Root::Root::deprecated to accept two arguments (text and bp
version) to check against the Root::Version and convert a dep warning
to a throw if the version matches up? Something like:
# maybe check against both 1.x and 1.00x?
$self->deprecated(-text => 'Use of foo() is deprecated. Use set_foo()
instead', -version => 1.7);
I don't think this'll break current code as _rearrange would just
default the first argument to '-text' if the order is indicated.
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