[Bioperl-l] Classifying SNPs

Abhishek Pratap abhishek.vit at gmail.com
Wed Jul 8 10:24:05 EDT 2009


Hi All

This might seem to be an old track question. However I was not able to
find a good answer in the many diff mailing list archives.

For all our SNP predictions we would like to know whether they are
synonymous / non-synonymous. If Non-synonymous/Exonic  then find the
position on the gene where amino acid is getting changed and to what
 ...Also info about indels will help.

I am not sure if something like this already exists. If not even some
pointers on how to move forward will help.

Thanks,
-Abhi



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