[Bioperl-l] Bio::Moose is now....
cjfields at illinois.edu
Wed Jul 29 22:15:27 EDT 2009
Well, I am from Texas...
On Jul 29, 2009, at 6:35 PM, Mark A. Jensen wrote:
> Excellent: more opensource beer! I like the south-of-the-border feel
> of BiomeX. cheers all
> ----- Original Message ----- From: "Chris Fields" <cjfields at illinois.edu
> To: "BioPerl List" <bioperl-l at lists.open-bio.org>
> Sent: Wednesday, July 29, 2009 2:35 PM
> Subject: [Bioperl-l] Bio::Moose is now....
>> Biome! This makes the most sense to me; as Mark points out the
>> name works as an appropriate acronym (BioPerl with Metaclass
>> Extensions), as well as a biome being (per wikipedia):
>> "a climatically and geographically defined areas of ecologically
>> similar climatic conditions such as communities of plants,
>> animals, and soil organisms ... often referred to as ecosystems".
>> Seems a fitting name for a open-source project. I'll be moving
>> the namespace over to Biome over the next couple of days on
>> github. Now I owe Mark some beer...
>> Now, for extensions, should I assume this will eventually be
>> BioPerl2 (and thus use BioX::*)? Or stick with BiomeX::*?
>> PS: Just a quick benchmark for the current Bio::Moose::PrimarySeq
>> implementation (we don't have SeqIO working as of yet, so the
>> benchmark script does the heavy lifting):
>> Bioperl-l mailing list
>> Bioperl-l at lists.open-bio.org
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