[Bioperl-l] Refseq Hits

shalabh sharma shalabh.sharma7 at gmail.com
Tue Jun 2 10:44:25 EDT 2009

Hi All,
          This is not really a bioperl query, but i am really confused and
need some help.
I blasted some sequences against refseq database (locally). After parsing
the blast result what i noticed that some description fields contain two hit
names like:
hit_name ->    gi|71082715|ref|YP_265434.1|
Description -> ubiquitin binding protein [Candidatus Pelagibacter ubique
HTCC1062] gi|91762865|ref|ZP_01264830.1| possible ubiquitin binding protein
[Candidatus Pelagibacter ubique HTCC1002]

So besides giving me description for hit_name (HTCC 1062) its also giving me
HTCC 1002.
I will really appreciate if someone can help me out.

Shalabh Sharma
Scientific Computing Professional Associate
Department of Marine Sciences
University of Georgia
Athens, GA 30602-3636

phone: 706-542-0341
email: ssharmai at uga.edu

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