[Bioperl-l] Next-gen modules

John Marshall john.marshall at sanger.ac.uk
Wed Jun 17 09:28:12 EDT 2009

On 17 Jun 2009, at 12:29, Elia Stupka wrote:
> Similarly, there seems to be little in bioperl-run to support tools  
> that have been developed in this area, such as Maq, BowTie, TopHat,  
> etc?

FYI I have a Bio::Tools::Run::Velvet wrapper [1] that I plan to submit  
in the not too distant future.  (First it needs some "blah blah"  
replaced with actual documentation and a test suite.)



[1] http://www.ebi.ac.uk/~zerbino/velvet/

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