[Bioperl-l] Fwd: Hackathon tomorrow (I think)

Chris Fields cjfields at illinois.edu
Wed Jun 24 17:10:34 EDT 2009


On Jun 24, 2009, at 11:44 AM, Jay Hannah wrote:

> On Jun 24, 2009, at 12:26 PM, Chris Fields wrote:
>> Let me know if anyone needs collab on biomoose on github; Mark  
>> Jensen's already added.
>
> Anything on github should be trivial, even with no perms -- we can  
> just fork and then send you (whoever) pull requests. github++  :)
>
>> 1) Any help towards bugzilla fixes would be most welcome.
>
> I don't know how to make any progress in bugzilla if no one has a  
> commit bit...?

For some reason I thought you had a commit bit; we can add you in if  
needed.  Anyway, patches are most definitely welcome ;>

>> 2) Better GFF3 integration
>> 3) Typed but lightweight seqfeatures
>
> Are there bugzilla tickets (or somewhere) describing those?

No as the issues are more complex than one single bug, but we do have  
something to help track for the time being:

http://www.bioperl.org/wiki/GFF_Refactor
http://www.bioperl.org/wiki/Align_Refactor

I'll probably file TODOs during the process for those refactors.  The  
easiest to tackle would be probably be Align/LocatableSeq refactors.

> I wonder if anyone can help me get out of sporadic MailMan  
> purgatory...
>
> Thanks,
>
> j

-c

PS - Don't feel constrained by the above.  There are many many areas  
to contribute to.




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