[Bioperl-l] Extreme newbie question.
adlai at refenestration.com
Wed Jun 24 22:08:31 EDT 2009
I have been trying to install BioPerl for a while now and after
pummeling my hard drive (Mac OS 10.5 intel) with several attempts at
Fink installation, a >cpan installation and removing my .cpan folder I
am still at square 0. I do not want to do anymore damage to my
computer, yet I really need a working install (especially to interface
with remote DBs like GenBank. Can anyone give me some advice here?
After each attempt, I have tried to run perldoc bptutorial.pl and
tried test scripts with "use Bio::Perl" in the headers and I just
receive error mesages like the following:
Can't locate Bio/Perl.pm in @INC (@INC contains: /home/users/dag/lib/
perl5/ /Library/Perl/Updates/5.8.8/darwin-thread-multi-2level /Library/
multi-2level /System/Library/Perl/5.8.8 /Library/Perl/5.8.8/darwin-
thread-multi-2level /Library/Perl/5.8.8 /Library/Perl /Network/Library/
Perl/5.8.8/darwin-thread-multi-2level /Network/Library/Perl/5.8.8 /
multi-2level /System/Library/Perl/Extras/5.8.8 /Library/Perl/5.8.6 /
Library/Perl/5.8.1 .) at trsh.pl line 1.
I have been working from the OReilly book astering Perl for
Bioinformatics and the INSTALL file and have scoured around the
BioPerl website and am still stuck.
Thanks in advance,
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