[Bioperl-l] problem of bioperl on mac

MADSGENE xuy at agr.gc.ca
Wed Mar 4 15:52:25 EST 2009

Hi bioperlers,

Thanks for all responses.
I removed the bioperl and reinstalled it by fink. It works.



> I installed the bioperl-pm586 version 1.5.2-4 in my macbook(MAC OS X
> version 10.5.6) using fink. I also found it in /sw/share/bioperl-pm586.
> However I failed to get it when I typed "which". When I typed >perl -e
> 'print @INC', it displayed
> /sw/lib/perl5/5.8.6/darwin-thread-multi-21evel...but no information about
> bioperl-pm586. I took the suggstion and added "setenv PERL5LIB
> ${PERL5LIB}:/sw/share/bioperl-pm586 " into .bashrc, it still did not work.
> I am grateful to you if anyone could help me out.
> I note there are two .bashrc files, one is in root and the other in home.
> If your suggestion is to modify these files, please let me know which one.
> Regards
> Xia Wang

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