[Bioperl-l] CPAN module?

Mark A. Jensen maj at fortinbras.us
Tue Mar 10 17:06:45 EDT 2009


Hi Caitlin-
[I'm copying your question to the bioperl list-- you will find this a great resource for 
all questions bioperl...]

B:D:HIV is part of the core, so it should have installed for you. You may want to upgrade 
to the stable 1.6 release (see http://www.bioperl.org/wiki/Release_1.6); it's definitely 
there. Post again to the list if you have trouble--
cheers,
Mark
  ----- Original Message ----- 
  From: Caitlin Gibbons
  To: maj at fortinbras.us
  Sent: Tuesday, March 10, 2009 4:54 PM
  Subject: CPAN module?


  Hi Dr. Jensen,



  I recently upgraded to BioPerl 1.5.9_RC4(Win32 ppm) and I was wondering if the ' 
Bio::DB::HIV' module was built-in or required a separate download? I received the 
following error when I attempted to use it:

  C:\Perl\bin>perl -e "use Bio::DB::HIV"
  Can't locate Bio/DB/HIV.pm in @INC (@INC contains: C:/Perl/site/lib C:/Perl/lib
  .) at -e line 1.
  BEGIN failed--compilation aborted at -e line 1.


  Thanks,

  ~Caitlin






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