[Bioperl-l] script to calculate percentage identity for BLAT psl

gopu_36 gopu_36 at yahoo.com
Sat Mar 14 21:04:32 EDT 2009

Please let me know whether any other way of calculating the precentage
identity for commandline BLAT results? . Thanks.

gopu_36 wrote:
> Hi,
> I did go through FAQ from BLAT on how to calculate the precentage identity
> from http://genome.ucsc.edu/FAQ/FAQblat#blat4
> As a new comer, I don;t usederstand on how to implement this. Please let
> me know how to plugin the script for my output.psl file. Please let me
> know. It would be of great help.
> Thanks and Regards.

View this message in context: http://www.nabble.com/script-to-calculate-percentage-identity-for-BLAT-psl-tp22476983p22519073.html
Sent from the Perl - Bioperl-L mailing list archive at Nabble.com.

More information about the Bioperl-l mailing list