[Bioperl-l] bl2seq

Mark A. Jensen maj at fortinbras.us
Mon Mar 23 09:56:40 EDT 2009

See the new scrap at
cheers, MAJ
----- Original Message ----- 
From: "shweta kagliwal" <shwetakagliwal at gmail.com>
To: <bioperl-l at bioperl.org>
Sent: Tuesday, March 17, 2009 7:01 AM
Subject: [Bioperl-l] bl2seq

>I want to carry out pairwise blast using bl2seq program in bioperl. I have
> installed bioperl-1.5.9.
> I have also installed standalone blast from ncbi ftp in my perl/bin folder.
> But when I run the attached script I get the following error-
> ref:
> cant locate method "next feature" via package "Bio:SearchIO:blast" at
> bl2seq1.pl  line 20, <GEN2> line 1.
> Error removing C:\DOCUME~1\ADMINI~1\LOCALS~1\Temp\qPx195u5TQ at
> c:/perl/site/lib/File/Temp.pm line 890.
> I cant get the error. Please help me.


> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/bioperl-l 

More information about the Bioperl-l mailing list