[Bioperl-l] bioperl / emboss on windows

yi wang wangyi2412 at gmail.com
Mon May 4 00:42:31 EDT 2009


---------- Forwarded message ----------
From: yi wang <wangyi2412 at gmail.com>
Date: 2009/5/4
Subject: bioperl on windows
To: bioperl-l at bioperl.org


I have installed the bioperl and emboss on my* windows xp*, as guided on the
web. But it
--------------------- WARNING ---------------------
*MSG: Application [needle] is not available!*
---------------------------------------------------


use warnings;
use CGI;
use Bio::Perl;
use Bio::Root::Root;
use Bio::Factory::ApplicationFactoryI;
use Bio::Factory::EMBOSS;
use Bio::Tools::Run::EMBOSSApplication;



*my $f = Bio::Factory::EMBOSS -> new();*
*$f->program("needle");*
#my $factory = new Bio::Factory::EMBOSS;
#my $compseqapp = $factory->program("needle");

I checked the manual and the emboss.pm, write the programe as the demo, but
it could work! How could it be the problem? Thank you very much!
*Looking for your reply!*


Best Wishes,



-- 
ºÍÄãÔÚÒ»Æð



More information about the Bioperl-l mailing list