[Bioperl-l] bioperl / emboss on windows

yi wang wangyi2412 at gmail.com
Mon May 4 00:42:31 EDT 2009

---------- Forwarded message ----------
From: yi wang <wangyi2412 at gmail.com>
Date: 2009/5/4
Subject: bioperl on windows
To: bioperl-l at bioperl.org

I have installed the bioperl and emboss on my* windows xp*, as guided on the
web. But it
--------------------- WARNING ---------------------
*MSG: Application [needle] is not available!*

use warnings;
use CGI;
use Bio::Perl;
use Bio::Root::Root;
use Bio::Factory::ApplicationFactoryI;
use Bio::Factory::EMBOSS;
use Bio::Tools::Run::EMBOSSApplication;

*my $f = Bio::Factory::EMBOSS -> new();*
#my $factory = new Bio::Factory::EMBOSS;
#my $compseqapp = $factory->program("needle");

I checked the manual and the emboss.pm, write the programe as the demo, but
it could work! How could it be the problem? Thank you very much!
*Looking for your reply!*

Best Wishes,


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