[Bioperl-l] question about in-between overlapping exact location
hartzell at alerce.com
Wed May 6 11:48:14 EDT 2009
Chris Fields writes:
> We should definitely come up with some test cases and expected results
> for this; e.g. whether 2^3 should overlap with 1..2 or 3..5, etc (I
> would guess, in the latter example, they shouldn't).
My expectations agree with your guess.
> Also, as these are LocationI-specific, I'm not sure we should make
> changes to RangeI methods. Maybe fix LocationI-specific bits within
> LocationI and delegate to RangeI::overlaps/etc in simple cases?
I think that LocationI would my intended victim. I'll build up some
test cases w/ expected output and a patch and see what people think
before I commit it.
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