[Bioperl-l] looks like a Bio::SeqIO error

fungazid fungazid at yahoo.com
Fri May 15 14:06:52 EDT 2009

Ok, thank you all very very much,

The problems were solved completely:

1) Bioperl 1.6 was installed (just needed to install XML-SAX)

2) after changing '-format' to 'Fasta' instead of 'largefasta', all problems
were gone. 

my $seqin = Bio::SeqIO->new('-format'=>'Fasta','-file'=>$file1);

LOOP1: while ( my $seqobj1 = $seqin->next_seq())

{ ....

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