[Bioperl-l] A question about iBio::Index: and its correct use

Hotz, Hans-Rudolf hrh at fmi.ch
Thu Nov 5 11:02:48 EST 2009


> -Then I´ll beg you to take a look at my scripts, because I don´t seem to
> catch the bug...

you haven't attached/included any scripts, have you?

Anyway, have you considered using BLAST indices (created with the additional
flag "-o") together with the tool 'fastacmd' (which also included in the
NCBI blast binaries) as a simple (and very fast) alternative for fetching

Regards, Hans

More information about the Bioperl-l mailing list