[Bioperl-l] arguments to call back functions in GBrowse2

Daniel Lang Daniel.Lang at biologie.uni-freiburg.de
Sun Nov 8 09:50:48 EST 2009


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Hi Lincoln,

a while back (May 29, 2009; 09:08pm) you replied to an even older thread
("Re: Access the parent of a Bio::DB::SeqFeature within a gbrowse config
callback function").

I missed your reply and did follow it up back then, sorry!

I'm currently facing the same issue again with gbrowse2. I have a
callback function for "balloon click". Following your last reply I
expected 5 arguments, but I am getting only three: $feature,$panel,$track.

In principle, I am using the latest releases/checkouts...
Which modules do I need to look at/update for this functionality?

Furthermore, is there a possibility to share global variables between
gbrowse2 and slaves? Should this work via init_code?
Should modules initialized in a conf be in the scope of a slave?

If not can I introduce modules via the slave config files, or do I need
to alter the slave scripts?


Thanks, again!

Cheers,
Daniel


PS: gbrowse2 rocks!
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