[Bioperl-l] summer code project on Bioperl

Robert Buels rmb32 at cornell.edu
Thu Apr 1 17:07:24 EDT 2010


Just so people know, Jun was taken care of in #obf-soc


Jun Yin wrote:
> Dear Sir or Madam,
> 
> I am a Ph.D. student in Bioinformatics in University College Dublin. I 
> saw the information for Google summer code project on Bioperl just 
> earlier today. I found the project on refactoring Bio::Align::AlignI and 
> Bio::Assembly are particular interesting to me. Would you like to send 
> me some information on that asap? I know it is a bit hustled to do that, 
> since it is almost deadline now. Otherwise, I will try my best to write 
> a proposal on that.
> 
> Concerning my relevant experience, I usually program in Perl and R 
> (bioconductor). My current research focuses on microarray design, 
> annotation and data mining. Please see my attached short CV. Besides, my 
> supervisor is Prof. Des Higgins, who is the author of the alignment 
> software Clustalw. It could be much beneficial to Bio::Align::AlignI, 
> which directly dealing with the input and output sequences from Clustalw 
> and other alignment softwares.
> 
> I have a few questions on the application procedure. I will appreciate 
> that if you can answer it asap. First, I saw the deadline for the 
> application on Google is April 9, but on Bioperl, it is April 2. Which 
> is the real deadline? Second, what is the request for the research 
> proposal, e.g. how many words/pages for it? Do I submit it to this email 
> address or through google summer code web site?
> 
> Thx in Advance,
> Jun Yin
> 
> Bioinformatics Lab,
> Conway Institute,
> University College Dublin
> 
> 
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> 
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