[Bioperl-l] Packages retrieving online alignment sequences

Jun Yin jun.yin at ucd.ie
Fri Aug 6 09:11:41 EDT 2010


Hi, Dave,

Thx for reminding me this. I will definitely try it.

Cheers,
Jun Yin
Ph.D. student in U.C.D.

Bioinformatics Laboratory
Conway Institute
University College Dublin


-----Original Message-----
From: Dave Messina [mailto:David.Messina at sbc.su.se] 
Sent: Friday, August 06, 2010 2:07 PM
To: Jun Yin
Cc: bioperl-l at lists.open-bio.org
Subject: Re: [Bioperl-l] Packages retrieving online alignment sequences

Sounds great, Jun!

Did you happen to test your code on very large alignments? I know there's
one in Pfam that's something like 100,000 sequences. An rRNA, I believe.


Dave


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