[Bioperl-l] fasta header replace
odclerck at gmail.com
Fri Aug 27 03:44:14 EDT 2010
Was wondering if someone had an easy script available that converts the
headers of a fasta sequences to a value stored in a separate text file.
Macrogen produces files with sequences that look more or less like this:
>100825-30_I01_CF_CentralAmerica1_A1_psbAF.ab1 1012, 1000 bases, 0 checksum.
I can filter out the position on the plate e.g. "A1" easily but would like
to replace this with the name of the strain stored in a different text file,
Realize this sounds pretty basic to most of you, but I'm pretty new at
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