[Bioperl-l] Flip a sequence (with features)

Roy Chaudhuri roy.chaudhuri at gmail.com
Fri Dec 10 07:53:17 EST 2010


See Bio::SeqUtils->revcom_with_features

Cheers,
Roy.

On 10/12/2010 12:40, Dan Bolser wrote:
> Hi,
>
> What is the best way to take a sequence covered in features and flip it?
>
> i.e. the orientation of all the features should be inverted, and their
> position on the sequence should be flipped, such that a feature near
> the start becomes a feature near the end...
>
> I'm sure there is a trivial solution to this, but I'm not sure where
> to start looking!
>
>
> Cheers,
> Dan.
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