[Bioperl-l] OX lines of EMBL files [patch included]
Jacob Bunk Nielsen
bunk at novozymes.com
Tue Dec 21 07:09:32 EST 2010
I have noticed that BioPerl does not write OX lines with NCBI TaxIDs in.
I'd like this feature even though the official way seems to have a a
source feature with a db_xref to a 'taxon:(\d+)' for this sort of thing.
I've found and example of an OX line being used for a TaxID at
Please find attached a patch for reading and writing NCBI TaxIDs to EMBL
files and a test that verifies that the TaxID will roundtrip being
written and then read.
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