[Bioperl-l] Fwd: megablast using bioperl

Smithies, Russell Russell.Smithies at agresearch.co.nz
Mon Feb 1 15:12:07 EST 2010


Have you read the docs? It's very well documented:
http://search.cpan.org/~cjfields/BioPerl-1.6.1/Bio/Tools/Run/StandAloneBlast.pm

Have you searched the BioPerl wiki? Again, well documented with examples:
http://www.bioperl.org/wiki/HOWTO:StandAloneBlast

And if that doesn't help, perhaps you need to improve your Google skills:
http://www.google.com/support/websearch/?ctx=web

--Russell



> -----Original Message-----
> From: bioperl-l-bounces at lists.open-bio.org [mailto:bioperl-l-
> bounces at lists.open-bio.org] On Behalf Of Jason Stajich
> Sent: Tuesday, 2 February 2010 8:48 a.m.
> To: BioPerl List
> Cc: xiujingg at yahoo.com
> Subject: [Bioperl-l] Fwd: megablast using bioperl
> 
> Xiujing -
> Your message is best asked on the mailing list.
> 
> Begin forwarded message:
> 
> > From: Xiujing Gu <xiujingg at yahoo.com>
> > Date: February 1, 2010 7:58:55 AM PST
> > To: jason at bioperl.org
> > Subject: megablast using bioperl
> >
> > Hello Jason:
> >
> > After numerous googling, I found you might be the only person who
> > knows about this subject. Would you so kindly show me an example of
> > setting up megablast using bioperl Bio::Tools::Run::StandAloneBlast?
> >
> > Thanks a lot!
> >
> > Best regards,
> > Xiujing
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> Bioperl-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/bioperl-l
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