[Bioperl-l] Aligning Reads
thomas.kallman at ebc.uu.se
Fri Feb 5 16:23:50 EST 2010
Not really related to bioperl, but you can find a nice list of
software aligning short read data at http://seqanswers.com/forums/showthread.php?t=43
On Feb 5, 2010, at 8:21 PM, shalu sharma wrote:
> Hi All,
> Is there any program available which can align reads
> in fasta format) against a reference sequence and the whole
> alignment can be
> viewed graphically.
> I tried bowtie but i think it only takes fastaq format.
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
More information about the Bioperl-l