[Bioperl-l] Aligning Reads
sharmashalu.bio at gmail.com
Fri Feb 5 16:43:26 EST 2010
Thanks a lot for your valuable suggestions.
2010/2/5 Thomas Källman <thomas.kallman at ebc.uu.se>
> Hi Shalu,
> Not really related to bioperl, but you can find a nice list of software
> aligning short read data at
> On Feb 5, 2010, at 8:21 PM, shalu sharma wrote:
> Hi All,
>> Is there any program available which can align reads (200-400bp
>> in fasta format) against a reference sequence and the whole alignment can
>> viewed graphically.
>> I tried bowtie but i think it only takes fastaq format.
>> Bioperl-l mailing list
>> Bioperl-l at lists.open-bio.org
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