[Bioperl-l] Bio::Graphics inside PHP

Lincoln Stein lincoln.stein at gmail.com
Mon Feb 8 11:33:18 EST 2010

There's an embeddable version of gbrowse_img that generates the imagemap so
it is clickable. If you use an <iframe> the formatting usually works out
pretty well.


On Mon, Feb 8, 2010 at 11:20 AM, Daniel Renfro <bluecurio at gmail.com> wrote:

> I've been trying different ways to do this same thing. At EcoliWiki.net we
> use GBrowse to show all the strains of Ecoli and assoc phage, plasmids,
> etc.
> so this is definitely something I think many other model-organism databases
> could use.
> The final solution was to construct a link to gbrowse_img with all the
> necessary variables coming in from $_REQUEST and throw it in the src=""
> attribute of the <img> tag. This works pretty good for what we're doing.
> Good luck.
> -Daniel Renfro
> Hu Lab Research Associate
> Dept. of Biochemistry and Biophysics
> 2128 TAMU
> Texas A&M Univ.
> College Station, TX 77843-2128
> 979-862-4055
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Lincoln D. Stein
Director, Informatics and Biocomputing Platform
Ontario Institute for Cancer Research
101 College St., Suite 800
Toronto, ON, Canada M5G0A3
416 673-8514
Assistant: Renata Musa <Renata.Musa at oicr.on.ca>

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