[Bioperl-l] how to get consensus_iupac from dna alignment that has lot of iupac ambiguity codes?
bhakti.dwivedi at gmail.com
Wed Feb 10 23:57:34 EST 2010
I am trying to make a consensus for the nucleotide sequence alignment.
The alignment sequences, however contain a lot of
IUPAC ambiquity codes. And this seems to throw off an error message
(indicating that it is a protein sequence) when I use
How can I fix this? Do I have to manually define the dna iupac alphabets?
I will appreciate any kind of help. Thanks!
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