[Bioperl-l] indexed fastq files
cjfields at illinois.edu
Mon Jan 4 16:59:50 EST 2010
Bio::Index::Fastq, maybe? To tell the truth, I haven't tried it since we refactored FASTQ parsing, so let us know if it doesn't work.
On Jan 4, 2010, at 2:00 PM, Albert Vilella wrote:
> Hi all,
> What is the best way to index fastq files, so that once clustered, I
> can provide a list of seq_ids and get
> them back in fastq format from the indexed db?
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> Bioperl-l at lists.open-bio.org
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