[Bioperl-l] installing bioperl for mac

Chris Fields cjfields at illinois.edu
Mon Jan 18 22:58:36 EST 2010


Yes, definitely!

-c

On Jan 18, 2010, at 9:41 PM, Scott Cain wrote:

> But make sure you have the developers tools installed before the first
> time you run the cpan shell; it will make your life easier.
> 
> Scott
> 
> 
> On Mon, Jan 18, 2010 at 9:20 PM, Chris Fields <cjfields at illinois.edu> wrote:
>> On Jan 18, 2010, at 6:46 PM, Omar Cornejo wrote:
>> 
>>> Dear People,
>>>  I have tried to install Bioperl in my new Mac Book, which carries
>>> the latest perl distribution (5.10.0) and for some reason I can't
>>> (using fink) make it recognize this version or perl.
>>>  I have tried:
>>> fink install bioperl-pm510
>>> fink install bioperl-pm5100
>>> 
>>> but neither one works.  Is it fine installing bioperl for perl v 5.9?
>>> 
>>> thank you,
>>> Omar Cornejo
>> 
>> fink doesn't have a package for perl 5.10.  You can install it using CPAN, however (it's pure perl), or use other UNIX-y options.  See the UNIX installation instructions on the wiki:
>> 
>> http://www.bioperl.org/wiki/Installing_Bioperl_for_Unix
>> 
>> chris
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>> 
> 
> 
> 
> -- 
> ------------------------------------------------------------------------
> Scott Cain, Ph. D.                                   scott at scottcain dot net
> GMOD Coordinator (http://gmod.org/)                     216-392-3087
> Ontario Institute for Cancer Research
> 
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