[Bioperl-l] Transcribe in bioperl

Mark A. Jensen maj at fortinbras.us
Mon Jan 25 16:19:24 EST 2010


I think we have that functionality in Bio::Tools::SeqPattern, 
courtesy of Bruno V---
----- Original Message ----- 
From: "Dan Kortschak" <dan.kortschak at adelaide.edu.au>
To: <bioperl-l at lists.open-bio.org>
Sent: Monday, January 25, 2010 4:00 PM
Subject: Re: [Bioperl-l] Transcribe in bioperl


>A reverse_translate to IUPAC degenerate codes is not a bad idea,
> particularly for PCR primer design.
> 
> Dan
> 
> On Mon, 2010-01-25 at 09:05 -0500, bioperl-l-request at lists.open-bio.org
> wrote:
>> On Jan 24, 2010, at 10:39 PM, Chris Fields wrote:
>> 
>> > ...And there might be a case for adding the analogous
>> reverse_translate().  
>> 
>> Bah.  Meant reverse_transcribe().  Ah well.
>> 
>> chris
> 
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