[Bioperl-l] HTMLResultWriter

lpaulet at ual.es lpaulet at ual.es
Mon Jan 25 16:53:07 EST 2010


Thanks Dave and Mark.

Quoting Dave Messina <David.Messina at sbc.su.se>:

>> my _$blast_report _=qx/$blast -p blastp -d $database -i $query -e   
>> $E_value -b 20000 -o $outputfilenameB/;
>
>> while( my $result = _$blast_report_->next_result ) { # get a result  
>>  from Bio::SearchIO parsing or build it up in memory
>
>
> _$blast_report_ is not a valid variable name, as far as I know. Plus  
>  there's a space between report and the final '_' in the first of  
> the  above two lines.
>
> Does this code compile?
>
> Dave
>
>
>
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