[Bioperl-l] Fwd: Codefest 2010: Final details

Christopher Bottoms maizemu at gmail.com
Sat Jul 3 11:30:14 EDT 2010


 I will be there first thing Wednesday morning. I'd be glad to help work on
any project.

On Sat, Jul 3, 2010 at 9:15 AM, Chris Fields <cjfields at illinois.edu> wrote:

> I will be there on the afternoon of the 7th.  There are a couple of
> projects one can look into for Moose and Perl 6 (Biome and BioPerl6).  I
> think Hilmar was to do some DBIx::Class stuff for BioSQL at one point, not
> sure where that is (might be surplanted by SQLite work?).  Would be nice to
> talk with Mark re: the wrapper system for BioPerl as well.
>
> So lots of stuff to think over and plan for.  Maybe we should move this to
> open-bio-l, or bioperl-l?
>
> chris (fields)
>
> On Jul 3, 2010, at 12:44 AM, Heikki Lehvaslaiho wrote:
>
> > Chris,
> >
> > I do not have too much experience on cloud computing, either. There
> > will be quite a few people from BioPerl . We'll meet and  come up with
> > a plan first thing in the morning. Unless someone has a very good one
> > ready for sharing...
> >
> >     -Heikki
> >
> > Heikki Lehvaslaiho - skype:heikki_lehvaslaiho
> > cell: +966 545 595 849  office: +966 2 808 2429
> >
> > Computational Bioscience Research Centre (CBRC), Building #2, Office
> #4216
> > 4700 King Abdullah University of Science and Technology (KAUST)
> > Thuwal 23955-6900, Kingdom of Saudi Arabia
> >
> >
> >
> >
> > On 3 July 2010 08:36, Christopher Bottoms <maizemu at gmail.com> wrote:
> >> Hi all,
> >>
> >> I was originally planning on working on cloud computing at the Codefest.
> >> However, the 2-day cloud computing tutorial that I was going to attend
> in
> >> mid June was canceled. Does anyone have any programming that they would
> like
> >> help with? I have experience with Perl 5, including Moose, and I am
> starting
> >> to dabble in Perl 6. I have also programmed in Java in the past. I hear
> >> Python is easy to learn, so I'd be open to working on a Python project
> as
> >> well.
> >>
> >> Thanks,
> >> Christopher Bottoms
> >>
> >> On Fri, Jul 2, 2010 at 8:38 AM, Brad Chapman <chapmanb at 50mail.com>
> wrote:
> >>>
> >>> Hi all;
> >>> Codefest 2010 is finally here: next Wednesday and Thursday at
> >>> Harvard Medical School and Massachusetts General Hospital in
> >>> beautiful Boston. All of the logistics, directions and details
> >>> are on the wiki page:
> >>>
> >>> http://www.open-bio.org/wiki/Codefest_2010
> >>>
> >>> If you want the short version: show up at Harvard Medical School on
> >>> Wednesday at 10am and we'll take care of the rest. Thanks to the
> >>> hard work of Oliver, Kimberly, Leah, Toshiaki, and Mitsuteru we'll
> >>> have coffee, lunches and internet. Thanks to Steffen and Ntino,
> >>> we'll have Amazon credits to utilize. And of course, there will be
> >>> BBQ and drinking on Thursday night when we are finished.
> >>>
> >>> I'm looking forward to a fun and productive time. The general plan
> >>> will be to spend a bit of time on Wednesday morning organizing
> >>> ourselves into like minded groups of folks, and then commence with
> >>> coding and collaborating.
> >>>
> >>> If you aren't able to make it and you're listed on the wiki page under
> >>> participants, please do cross your name off so we have a good idea of
> >>> final numbers. Likewise, if you are coming but haven't put your name up
> >>> there please add it.
> >>>
> >>> If you are interested in helping with making software and data
> >>> available on shared cloud resources, here are the latest Amazon
> >>> AMIs, snapshots, and the code base:
> >>>
> >>> Cloud BioLinux images:
> >>> 64bit: ami-d62cc4bf
> >>> 32bit: ami-5423cb3d
> >>>
> >>> An EBS public snapshot with indexed genomes:
> >>> snap-67446d0f
> >>>
> >>> Infrastructure:
> >>> http://github.com/chapmanb/bcbb/tree/master/ec2/biolinux/
> >>>
> >>> Send an e-mail with any questions, thoughts or concerns. My phone
> >>> number is 617-447-8586 in case you end up hopelessly lost somewhere
> >>> in Boston and are desperate to begin programming.
> >>>
> >>> Looking forward to seeing everyone next Wednesday,
> >>> Brad
> >>
> >>
>
>


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