[Bioperl-l] Infernal parser

Chris Fields cjfields at illinois.edu
Mon Jul 5 11:19:13 EDT 2010


Just looked at the code, it appears this is a bit inflexible; I had originally set it up so that you could define INFERNALDIR for this, but it appears this is never used.  I can work on adding this in.

chris

On Jul 5, 2010, at 7:57 AM, Marcela Davila wrote:

> Hi there!
> 
> I was wondering where I can set a different program directory (a local
> directory that has a different version of the Infernal package) rather
> than that specified in the ENV variable to run cmsearch while using
> Bio::Tools::Run::Infernal.
> 
> Thanks!
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