[Bioperl-l] No error message is given for a warning (EUtilities)

Smithies, Russell Russell.Smithies at agresearch.co.nz
Mon Jul 12 00:07:28 EDT 2010

I think you mean "on your PC the box is too small". 
Because BioPerl is cross-platform it shouldn't be customized to look best on specific hardware or software , for example, Windows 7 with IE9.
The Deobfuscator is included in BioPerl so you are free to edit and run on your own web-server with colors and styles to suit your exacting tastes.

And as Chris said, if you'd like added documentation or a web interface changed so it looks better on your PC I suggest you start writing some patches.
Don't forget, the BioPerl developers are all volunteers and don't work for you!!



> -----Original Message-----
> From: Chris Fields [mailto:cjfields at illinois.edu]
> Sent: Monday, 12 July 2010 3:46 p.m.
> To: Peng Yu
> Cc: Smithies, Russell; bioperl-l at lists.open-bio.org
> Subject: Re: [Bioperl-l] No error message is given for a warning
> (EUtilities)
> On Jul 11, 2010, at 8:15 PM, Peng Yu wrote:
> > On Sun, Jul 11, 2010 at 8:08 PM, Smithies, Russell
> > <Russell.Smithies at agresearch.co.nz> wrote:
> >> Take a look at the deobfuscator:
> >> http://bioperl.org/cgi-
> bin/deob_interface.cgi?Search=Search&module=Bio%3A%3ADB%3A%3AEUtilities&so
> rt_order=by+method&search_string=Bio%3A%3ADB%3A%3AEUtilities
> >>
> >> Details all the methods including those that are inherited.
> >
> > This is every useful when l look for an inherent method. The box
> > titled "methods for Bio::DB::EUtilities" is too small. May I suggest
> > to make it a little bigger? Also, the box above it takes too much
> > space, it is better to shrink it since there in only one class. Would
> > you please help improve the appearance a little?
> >
> > --
> > Regards,
> > Peng
> Patches welcome
> chris

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