[Bioperl-l] bioperl wiki oddity for 'installing bioperl in unix'

Chris Fields cjfields at illinois.edu
Fri Jul 23 13:20:44 EDT 2010


http://github.com/cjfields/bioperl6
http://github.com/cjfields/biome

:)

chris

On Jul 23, 2010, at 12:17 PM, Pablo Marin-Garcia wrote:

> 
> extending a bit more this off topic thread about nice perl modern tools, just mention  for the adventurous that you would be able, next month, to test porting some bioperl to perl6 if you wish:
> 
> http://pablomarin-garcia.blogspot.com/2010/07/perl-rakudo-start-will-be-available-at.html
> 
> I have not tried the inline-Rakudo yet but seems a nice way of start to test perl6 inside your perl5.
> 
> 
> Have a good weekend
> 
>  -Pablo
> 
> 
> 
> On Fri, 23 Jul 2010, Chris Fields wrote:
> 
>> 
>> On Jul 23, 2010, at 11:52 AM, Pablo Marin-Garcia wrote:
>> 
>>> On Fri, 23 Jul 2010, Dave Messina wrote:
>>> 
>>>> Thanks for that addition to the wiki, Pablo! Much appreciated.
>>>> 
>>>> I did not know about local::lib.
>>>> 
>>> 
>>> [This is a bit off-topic but probably useful for core developers]
>>> Then probably you don't know about
>>> 
>>> App::perlbrew
>>> 
>>> Very useful when you want to test your api in different perl versions, or now that perl is releasing new versions more frequently you can test the latest one, easily.
>> ...
>> 
>> yes, just started using this myself.
>> 
>> Re: local::lib, I don't use it much, but I have found perl 5.12 is a bit easier when installing modules locally.  In fact, will probably install perl and modules locally from now on instead of going through the hassle of dealing with sysadmins.
>> 
>> chris
> 
> 
> -----
> 
>  Pablo Marin-Garcia
> 
> 
> 
> -- 
> The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE. 




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