[Bioperl-l] What implements SeqFeatureI?

Dan Bolser dan.bolser at gmail.com
Tue Jul 27 04:53:49 EDT 2010


On 26 July 2010 16:35, Scott Cain <scott at scottcain.net> wrote:
> Hi Dan,
>
> I think there are probably several BioPerl classes that implement
> Bio::SeqFeatureI, like Bio::SeqFeature::Generic.  What are you looking
> for?

A way to find what implements what... something like javadoc for bp.

Really I'm looking for a nice 'ontology' of SeqFeatures.

I was thinking that Contig.pm should implement Bio::SeqFeatureI.


> Scott
>
>
> On Sun, Jul 25, 2010 at 12:40 PM, Dan Bolser <dan.bolser at gmail.com> wrote:
>> Which objects implement SeqFeatureI, and how should I find that info?
>>
>> Sorry for the gratuitous noobs.
>>
>> Cheers,
>> Dan.
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>
>
>
> --
> ------------------------------------------------------------------------
> Scott Cain, Ph. D.                                   scott at scottcain dot net
> GMOD Coordinator (http://gmod.org/)                     216-392-3087
> Ontario Institute for Cancer Research
>



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