[Bioperl-l] Download sequence by genomic location
cjfields at illinois.edu
Wed Jul 28 18:39:07 EDT 2010
Not for UCSC (IIRC they specifically requested that we not set this functionality up in case their servers were hit too often). I think Galaxy does this, though, and of course you have EntrezGene and the Ensembl API as alternatives.
Might be worth re-checking with the UCSC folks to see what their take is on this now...
On Jul 28, 2010, at 5:14 PM, Peng Yu wrote:
> I could download a sequence by location at genome browser.
> I know that there are ways to get the sequence. But I don't see a way
> to get the sequence by location. Could anybody let me know if there is
> such a function in bioperl?
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
More information about the Bioperl-l