[Bioperl-l] Bio::Tools::Run::Primer3 vs Web Primer 3

armendarez77 at hotmail.com armendarez77 at hotmail.com
Wed Jun 9 08:38:24 EDT 2010

Just wanted to say thanks for your suggestions, but my system admin was unable to install the bioperl-dev due to it having too many requirements.  However, I found a temporary work around using 'PRIMER_PICK_ANYWAY' and then parsing those results based on my own primer specifications.

When will the next stable release of bioperl that includes B:T:R:Primer3Redux and B:T:Primer3Redux?

Thanks again,


Subject: Re: [Bioperl-l] Bio::Tools::Run::Primer3 vs Web Primer 3
From: David.Messina at sbc.su.se
Date: Mon, 7 Jun 2010 22:38:48 +0200
CC: cjfields at illinois.edu; bioperl-l at lists.open-bio.org
To: armendarez77 at hotmail.com

On Jun 7, 2010, at 10:32 PM, <armendarez77 at hotmail.com> wrote:Hello,

My linux system administrator is getting the following errors while trying to download bioperl-dev from the git repository.  Is he using the correct git path?

No, it should be git://github.com/bioperl/bioperl-dev.git
On the other hand, if he doesn't want to mess with git, he can just click the "download source" button (right underneath the search box on the upper right of the page) to get a tarball.
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