[Bioperl-l] Getting the HMMer3 parser integrated into the next BioPerl release, call for testing

Kai Blin kai.blin at biotech.uni-tuebingen.de
Thu Jun 17 04:23:29 EDT 2010

Hi folks,

in the past days, I've been working on the tests for the HMMer3 parser,
and with my last commits all the tests are passing for all the output
files I've seen.

So I'd like to propose the bioperl-hmmer3[1] tree to be merged into the
main tree for the next BioPerl release.

Of course, if there's still some corner cases the parser doesn't handle
that you're running into, please send me an output file showing the
problem you're seeing, or, even better, send me a patch. :)


[1] http://github.com/bioperl/bioperl-hmmer3

Dipl.-Inform. Kai Blin         kai.blin at biotech.uni-tuebingen.de
Interfakultäres Institut für Mikrobiologie und Infektionsmedizin
Abteilung Mikrobiologie/Biotechnologie
Eberhard-Karls-Universität Tübingen
Auf der Morgenstelle 28                 Phone : ++49 7071 29-78841
D-72076 Tübingen                        Fax : ++49 7071 29-5979
Homepage: http://www.mikrobio.uni-tuebingen.de/ag_wohlleben

More information about the Bioperl-l mailing list