[Bioperl-l] Bio-SCF from CPAN == error installation
scott at scottcain.net
Thu Mar 11 16:33:47 EST 2010
A few things:
* It would be better to start a new thread to ask an unrelated
question, since people may see the subject of this thread and ignore
it if they don't know the answer to the original question.
* Can you please try to ask your question again, with more details?
Like what have you done already, what was the result, and what would
you like for it to look like. If you want it to look like something
that is on the wiki, link to that something. The Howto page you
linked to has lots of pictures on it.
On Thu, Mar 11, 2010 at 3:49 PM, Jessica Sun <jessica.sun at gmail.com> wrote:
> Thanks, I got it resolve.
> Do any one knows how to add a scale of the blast hit image through
> Bio:Graphics, I mean the rectangle should be difference width rather than
> the same at the example. shown here
> On Thu, Mar 11, 2010 at 3:02 PM, Robert Buels <rmb32 at cornell.edu> wrote:
>> Hello Jessica,
>> For Bio-SCF, you have to have the staden package installed. See the
>> INSTALL notes included in the Bio-SCF distribution.
>> The easiest way to view the INSTALL notes for a perl module's distribution:
>> - go to http://search.cpan.org/
>> - search for 'Bio::SCF'
>> - click the link to the Bio-SCF-1.03 distribution you see in the search
>> - the page linked here describes the installation package that Bio::SCF
>> comes in.
>> - On that page, you will see a link to the INSTALL notes for it.
>> This is a good thing to know how to do when you have problems with other
>> perl modules as well.
>> But yes, as Chris said, those installation notes direct you to install the
>> staden io-lib libraries from staden.sourceforge.net.
>> Jessica Sun wrote:
>>> *I downloaded module
>>> *>* > Bio-SCF from CPAN.
>>> *>* > And I am trying to install it when I got the following error. Can
>>> *>* someone help? Thanks much in advance
>>> Note (probably harmless): No library found for -lstaden-read
>>> Writing Makefile for Bio::SCF
>>> how to obtain the missing library
> Jessica Jingping Sun
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
Scott Cain, Ph. D. scott at scottcain dot net
GMOD Coordinator (http://gmod.org/) 216-392-3087
Ontario Institute for Cancer Research
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