[Bioperl-l] G.U.I for bioperl on XP and possibly Vista
Russell.Smithies at agresearch.co.nz
Mon Mar 22 17:10:36 EDT 2010
wx www.wxwidgets.org looks very interesting - I didn't realize Cn3D used it.
wxPerl http://wxperl.sourceforge.net might be worth a look.
> -----Original Message-----
> From: bioperl-l-bounces at lists.open-bio.org [mailto:bioperl-l-
> bounces at lists.open-bio.org] On Behalf Of Robert Buels
> Sent: Tuesday, 23 March 2010 9:34 a.m.
> To: Charles Embry
> Cc: bioperl-l at lists.open-bio.org
> Subject: Re: [Bioperl-l] G.U.I for bioperl on XP and possibly Vista
> If I were doing a GUI for BioPerl, I would certainly not try to use
> Java. You could have a look at how Padre, the Perl IDE (written in Perl
> is implemented): http://search.cpan.org/~plaven/Padre-0.58/ They use
> wx, I think.
> But, a simple web or command-line application would be far easier to
> write, in any language, if you can find somewhere to host it.
> Charles Embry wrote:
> > I want to create a Gui that will use current bioperl modules(along with
> > I am writing). It will be on a windows machine that runs XP and maybe a
> > laptop with Vista.(this is a project i am working on in Graduate school
> > a professor). It will be id'ing promoter types in eukaryote organisms
> > also do multiple alignments.
> > What recommendations do yo suggest to use t develop this? A java
> > application? If so how hard is it to get Java to use perl and bioperl
> > modules? Another language? Is there a tool to directly develop a GUI for
> > bioperl modules that does no use another language?
> > I will need to tag certain sequences with user specified colors and
> > Thanks for the help
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