[Bioperl-l] aacomp.pl problem
David.Messina at sbc.su.se
Fri Mar 26 08:51:11 EDT 2010
The latest version of aacomp (from subversion) worked fine for me. That version has this line near the top of the script:
# $Id: aacomp.PLS 15088 2008-12-04 02:49:09Z bosborne $
If yours is different, you might try upgrading to the latest version.
In fact, I'm almost certain that is the problem, since the valid_aa method is in the Bio::SeqUtils class, not Bio::Tools::CodonTable.
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