[Bioperl-l] Running Smith Waterman alignments in BioPerl
awitney at sgul.ac.uk
Fri Mar 26 11:20:36 EDT 2010
Is the bioperl-ext package still being developed? I ask because i am looking at running some SW alignments using the pSW module, but the simple example in the pod gives the error
"The C-compiled engine for Smith Waterman alignments (Bio::Ext::Align) has not been installed.
Please read the install the bioperl-ext package"
even though i did compile and install the Bio::Ext::Align package
If not using the pSW module, what do other people use for this?
More information about the Bioperl-l