[Bioperl-l] parsing PubMed retrievals

Amar Singh singh.amarv at epa.gov
Tue Nov 9 13:38:18 EST 2010


Tom Keller <kellert <at> ohsu.edu> writes:

> 
> Greetings,
> I'm getting the following error from the bioplerl 1.6.1 example
> 
> $ perl biblio-eutils-example.pl<http://biblio-eutils-example.pl>
> Can't call method "text" on an undefined value at
/Library/Perl/5.10.0/Bio/DB/Biblio/eutils.pm line 378.
> 
> Any suggestions for getting this to work?
> 
> thanks,
> 
> Tom
> MMI DNA Services Core
Facility<http://www.ohsu.edu/xd/research/research-cores/dna-analysis/>
> 503-494-2442
> kellert at ohsu.edu<mailto:kellert <at> ohsu.edu>
> Office: 6588 RJH (CROET/BasicScience)
> 


Tom,

I am also facing the same problem. This was working a month back and now when I
wanted to test new thing it is giving me the same error. I think this is due to
some changes in the way we access the data. Will keep updated if I find a
solution and same way you too. 

Thanks,

Amar



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