cjfields at illinois.edu
Fri Oct 8 11:16:21 EDT 2010
Correct, MatrixI (and pretty much any other module 'FooI') are interfaces for API consistency.
On Oct 8, 2010, at 9:37 AM, Dave Messina wrote:
> Hi Anna,
> You will want to use Bio::Matrix::IO to read in a Phylip matrix.
> Something like:
> use Bio::Matrix::IO;
> my $parser = Bio::Matrix::IO->new(-format => 'phylip',
> -file => 'phylipdist.out');
> my $matrix = $parser->next_matrix;
> On Sep 29, 2010, at 15:28 , <A.Vakhrusheva at lumc.nl> wrote:
>> I have a question concerning this interface.
>> I want to calculate p distances matrix, but what format is acceptable
>> for input? Phylip doesn't work
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